CPC - Coding Potential Calculator

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>AF282387 Filobasidiella neoformans calcineurin B regulatory subunit (CNB1) mRNA, complete cds
ATGGGTGCCGCTGAATCCTCCATGTTCAACTCTCTGGAGAAGAACTCCAACTTCTCAGGACCGGAGCTTA
TGAGGTTGAAGAAGAGGTTCATGAAGCTTGACAAGGACGGTTCCGGATCGATTGACAAAGACGAGTTTCT
TCAGATCCCTCAAATCGCGAATAACCCTTTGGCGCATCGAATGATAGCAATCTTTGATGAAGATGGAAGT
GGAACGGTTGACTTCCAAGAATTTGTCGGAGGTTTGAGCGCTTTCAGTAGTAAAGGAGGTCGTGATGAGA
AGCTGAGATTCGCTTTCAAGGTGTACGACATGGATCGAGACGGCTACATCTCTAACGGTGAACTGTATCT
TGTGTTGAAGCAAATGGTCGGAAATAACCTTAAAGACCAACAATTGCAACAAATTGTAGACAAAACCATC
ATGGAGGCTGACAAGGACGGGGATGGAAAGCTCTCTTTTGAGGAGTTCACACAAATGGTCGCCAGCACAG
ATATTGTGAAGCAAATGACCCTTGAAGATCTTTTCTAA

>Tsix_mus NR_002844.1 Mus musculus X (inactive)-specific transcript, antisense (Tsix) on chromosome X
GTGTGTTCATGCGTGCGCACGTGTACCCGTGCGTCCACACTCCGCCAGCACGTGTGCTAGCTTGCAAGTT
TTCAGTTTGAGTACAGACACCAGGCCATAGCCCAATGGCAGCAGTGACAGGGAGGACCGTGGCAGCATGT
TACAATCAGAAGACAACTTCCGGATTTTCACTCTGTCCTAAAAAGGTGGTCAAGTGTGCTAACCACACCC
TCTCAGCAGGATCCCGCGCCTCAAGAGCCTTAGGTCCCGCCCCACACTCCCTCAAACCCTCAGTGCAGCG
CTTGTGTCAGGCGCAATCTCGCAAGATCCGGTGAGGCGCTACGTCGTGCTCCACTCGGTCCCAAAAGTAC
CTGCAAGCGCTACACACTTGCGCTCGGCGCCCTTGCTCTGTTCTCACTTTCCGAGATATCCACGCATCTT
GAGTCCTGCATCCACTCCCGGGAGGCGGCTGCGGCAAGCGCGTGATGGAAGAAGAGCGTGATAGCCAGCT
AGACAGGTGGCCAGAGCGGAGCGGACAGTGGAGCGATGGCTACGTGCTTGCGGGACAGCGGAAGAGATGG
TTAAAGTGATTGCCAAGCAGCAGAAAGATTCCTAAAATGCTTGCCAGCTATGCGGAGATGAAGGTGAGGT
TTCAATGATTTACATCGACCAAGAACCCGCAGCCTCGGTCTCTCGAATCGGATCCGACATCATCCAACAC
TTCAGTGTTAGAATTGCAAGCATGCGCTCTCCCGACCTGGGCAGGCACTTCGAAAAAATGATGACTAAAG
ACACACGTGAAGTACCAAGCGAAACTCACGTCCTTATGGGACAGTGACTCATCACAGTCTAATTCCATCC
TGGCCACCAAGCAATAATGCACATTTCTAACTGGAAGTCAAGCAAACACCAACACTTTCACACTTGTGCC
CATTTCTGACGAGTTACGTCAAGTGGCAACCAACACTTCCACTTAGCCTTGCCTCAGCTTCGAGTGGCAC
AAGGTAGGACCAACCACACCCTACCATAATGCACCAAGTGTACCCTCGGGCAAAGCCCGCCAAGTAGCTA
AAGCCCGCCAAAAAAAAAATCACTGAAAGAAACCACTAGAGGGCAGGTCACATGACTTCCGCCATCTTAG
ACACATTCAAGAGCATGTGCCACCTCTCCAGGCTAACTCAGACATGAAGCTGACATGTGACACACAAAGC
CCTTTGCGTTATACCGCACCAAGAACTTGAGCCGCCATCTTTTCCTGTACGACCTAAATGTCCTATAATC
CATTGCTACACACCAGAACAAAGATTGGGCTGTCGAGCCTCGGGTGGAGCCCCCGAGCCGCCATTTTATA
GACTTCTGAGCAGCCCTTAAAGCCACGGGGGACCGCGCCAGGGGTCCATATGCACACACACCCTGCCCAA
TCCCCACACCCACGCTGAGCCCTATCCCCTAGTCCTCTGCGGCTTCCGCGCAACACCGCACACTAATACG
AGCACTCCTTGGCTTTCTCTTCCGGCTAGCACAACCCCGCAAATGCTACCACAAATCAAGGCGAATCCCG
CAACCCCGCACATATAAAGAAAGCCTTTAGCTAGCGCAGCGCAATTGGTTGCTTTTATCCAGTCCGCTGT
GCTCCTCGGTGTCCTAATTCTTGGCGTAACTGGCTCGAGAATAGCCGTATCACGCAGAAGCCATAATGGC
GGACGCGGGCTCTCCACGCCCTGAACACCCACTCAGTTTAAGAGCAAAGTCGTTTTTCTAAGCCATAGGT
TCACTCACACAGCACCAAACGATCAGCAGCAACAGTACACGCAAATAAGAGGCATAGATATTCCAGGTAG
TGCAATAACTCACAAAACCATATTTCCATCCACCAAGCCCCGTTGGGCCTGTAAAAAAAAAATTTAAAGC
AGGTATCCACAGCCCCGATGGGCAAAAGAAAAAGAAAAAAAAATAATAACAGCAGGTATCCGAGGCCCCG
TTGGGCATGGGAAAAAAAGACTAAACGCAGGTATCCGAGGTCCCGATGGACCGAGAAAGGTTTTTTTTTT
TTTTTTTTTTTTTACAAAAAGCAGGTATCCATGGCCCCGATGGGCTAAGGAGAAGAAAAAAAGAATAAAA
GCAGGTATCCACAGCCCAGATGGGCAAGTTTAGAAAAAAAAATAATAAGAAAAAAAAAGAATGAAAAGGC
AGGTAAGTATCCAAAACCCCGTTGGGCATGGAATGGCGGGGAGGACACACAGGTATCCGTGGCCCCGATG
GGCAAGATTATATAAACAATGAAAGAAAGGTAAGTCCACCATACACACACAAGTATCAACCAAAAGGCAC
AACAAAGAAATATTCCTTAAAAATGAAAAATTGACTGAAAATATTACAAATATCAAAAAGTATGGAGGAC
ATGTCAAAAAAAAAATCTTACCAGAACATATCAAAACGTCAAAAATCTCGTGGAATTTTGATATGTTTTC
TTAAATAAGCCATAAGGCTTGGTGGTAGGGGAACTAAAAATGTTCCCCCAAAGCTCCTTAGATGGAGAGA
AACCACGGAAGAACCGCACATCCACGGGAAACGAGCAAACATGGCTGGAGCAAGCCGTTGCACGCCTTTA
ACTGATCCGCGGCGCTGAAGGCGGAGAGACCAGAAGAGGAGTGGCCACAAAGATTGCAATTCTGACATCT
TATTGGACCTTTAGGTCTAACTATATTATAAAAAAATTAAAATGAATAAAGATGGAGGTACGTAAGCTCA
GTGACATGACGCGTGAATTTCATTATTTTGCGCGATAATGAAGGATTATCCTATTTTACAGCTAAAAACG
TTTATGTAGAACTTCACATAAACATTTGGGTGTGTACATTTAGCACACACCTGTCTATGCAAAATTTCAA
TATATCTTCTACTTGGACAAACCATGTGTCGCTCCGGTCTTGGACACTAGAAGTTCTTCTGCATTAGTTG
GCGACCTCAGATGAGGAGAGGAAAGGGTAGAAATGCCTCACAAAATGGCTCCTTGGTTCCTAAATTATCA
GAGTATTAGTTGTGACCGATTTGGAGGGCTTACGCTCATAGTTTTGGGTCATTGGCATCTTAGTCTTTCT
CTGGGAACCTGGTGACTCCATACCTTGGGACAAAAACGCACTGAAGACGTTACTAGCTAGCAGTAATGAA
AAATAATTCCTAAATGCCAAAGCAAAGCCTTAGGGAATAATAGCTCATTGGTATCTTACTCGCCCCAGAG
ACACTGCTAACTTAAAAGAACTGTCAAATTTTGTTAACTGTCAAACTATGAATATCCACATGAAAGAGAT
CAGACACCCTGGGTATTAGAAAATCAAAGGATATGTTGTCTCGTTGATCACGCTGACAAATAATTCACAG
TCTGTTCTAAGTTCCCTTTAGGCGTCCCATGAATAATAAAGGACACAAAATTGGTTTGCTTATGGACGAT
CAAAGTGCCAGCAATTCAGTAATCTTACTATTGAGGTGGTTCAGGTAGGGATGGAAAAATATCTGCTACA
AAATAAACAGTTTCAACCAAAAGAAAAACAAATTAACAAGGTAAATAAATGATGCACACAGACTGAATAA
ACCAGCAGGTGGCAGCATGAATCTTTCCAAGGCATCTGAAGCCAAACTTGGAGTGCAAAAGGATTCCTAT
CTGAATTGAGAAGTAAAGGTTACTTTGTCTAACTTTAGTTGACAGAGCGATCAGGATCAGAGTAACAAGC
ACACCAAAAGCATCACCAGTGAGAAGTCACATAGGACATATTAGGGAAAAAAGACCCAAGGAAGGGCTCT
TCACAGCTAAGAGCACCTGGCTCCACGATGGATATGGCTTTGTATAAACGAGAACTTCTAAATGAGCTGT
ACAAAGAGAATTTAGAACTTGCGAGGTACTGGTCACAGATTATGCAAGCCAGTGTATCATTTTTGTGGGG
ATGCTAGAGAGAATCATCAAATTAAAGAGTTAAATTTAGTCTCTGTGTTTTACTTAGTCCCAATTCTTGC
AAAGGTCATCATTCTTTCTCACACCGTGTACATCAAGGTATGTCAGGTTTCGGGGACACTTTTTAGTCTT
ATCACAAGAAAGCATGAAGGGATATGTGCTAAAACTCAGTTCCTGGGCTGGAGAGATAGCTCAGTGGTTA
GGAGTGCTGACTGCTCTTCCAGAGGGCCTGAGTTCAATTCTCAACAACTTCGTTGTGGCTCACAGTCATC
TGTAGTGGGGGATCCGATATCTAACCTTCTTCTGATGTATCTGAACAGTGACCGACAGTGTACTCACATT
AAATAAATATTTTTCTAAAAAACACCTCCA

additional blast search

NOTE: The UTRdb and RNAdb blast search is NOT a part of the CPC algorithm. We make the service avaliable here to provide additional information for users. And users should know that switching on these options might slow the speed a little.

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